| Overall Ranking | Total | Sprint | Long D. |
| Pts | Rk | Pts | Rk |
| 1. Elena Vaelbe Trubitsina |  RUS | 940 | 472 | 2. | 340 | 1. |
| 2. Stefania Belmondo |  ITA | 909 | 489 | 1. | 280 | 2. |
| 3. Katerina Neumannova |  CZE | 525 | 321 | 3. | 99 | 8. |
| 4. Nina Gavriljuk | RUS | 518 | 203 | 6. | 205 | 3. |
| 5. Olga Danilova | RUS | 414 | 142 | 8. | 162 | 5. |
| 6. Bente Skari Martinsen |  NOR | 391 | 232 | 4. | 95 | 10. |
| 7. Marit Mikkelsplass Wold | NOR | 367 | 114 | 13. | 167 | 4. |
| 8. Larissa Lazutina Ptitsyna | RUS | 366 | 130 | 10. | 136 | 6. |
| 9. Trude Hartz Dybendahl | NOR | 334 | 225 | 5. | 44 | 19. |
| 10.Ljubov Egorova | RUS | 271 | 135 | 9. | 96 | 9. |
| 11.Anita Moen | NOR | 265 | 117 | 11. | 79 | 12. |
| 12.Brigitte Albrecht Loretan |  SUI | 219 | 116 | 12. | 67 | 16. |
| 13.Kristina Smigun-Vaehi |  EST | 211 | 111 | 15. | 39 | 21. |
| 14.Elin Nilsen | NOR | 203 | 58 | 27. | 109 | 7. |
| 15.Sophie Villeneuve |  FRA | 201 | 112 | 14. | 49 | 18. |
| 16.Antonina Ordina |  SWE | 192 | 107 | 17. | 17 | 34. |
| 17.Julija Tchepalova | RUS | 183 | 108 | 16. | 75 | 13. |
| 19.Fumiko Aoki |  JPN | 171 | 162 | 7. | 1 | 54. |
| 20.Irina Taranenko Terelia |  UKR | 169 | 56 | 28. | 67 | 16. |
| 21.Sabina Valbusa | ITA | 162 | 61 | 26. | 75 | 13. |
| 22.Anke Reschwamm Schulze |  GER | 157 | 73 | 20. | _ | -. |
| 23.Olga Savialova | RUS | 148 | 77 | 18. | 71 | 15. |
| 24.Gabriella Paruzzi | ITA | 144 | 65 | 23. | 34 | 23. |
| 25.Annick Vaxelaire-Pierrel | FRA | 133 | 75 | 19. | 43 | 20. |
| 26.Sylvia Honegger | SUI | 98 | 64 | 25. | _ | -. |
| 27.Constanze Blum | GER | 82 | 50 | 29. | 16 | 36. |
| 28.Natalia Baranova | RUS | 81 | 43 | 32. | _ | -. |
| 28.Tuulikki Pyykoenen |  FIN | 81 | 43 | 32. | 26 | 27. |
| 28.Riikka Sirvioe | FIN | 81 | 14 | 47. | 23 | 31. |
| 31.Satu Salonen | FIN | 78 | 19 | 43. | 25 | 29. |
| 31.Maria Theurl |  AUT | 78 | 21 | 40. | 33 | 24. |
| 33.Maj Helen Sorkmo | NOR | 77 | 72 | 21. | 5 | 45. |
| 34.Annika Evaldsson | SWE | 75 | 50 | 29. | _ | -. |
| 35.Manuela Henkel | GER | 73 | 65 | 23. | 7 | 43. |
| 36.Alzbeta Havrancikova |  SVK | 69 | 29 | 35. | 18 | 32. |
| 37.Karine Laurent Philippot | FRA | 52 | 21 | 40. | 17 | 34. |
| 37.Kati Pulkkinen | FIN | 52 | 6 | 56. | 16 | 36. |
| 39.Kati Venalainen | FIN | 50 | 23 | 39. | 27 | 25. |
| 40.Kathrine Rokke | NOR | 49 | 34 | 34. | 15 | 39. |
| 41.Manuela Di Centa | ITA | 48 | _ | -. | 26 | 27. |
| 41.Valentina Shevchenko | UKR | 48 | _ | -. | 27 | 25. |
| 43.Renate Roider | AUT | 46 | 8 | 53. | _ | -. |
| 44.Guidina Dal Sasso | ITA | 44 | 44 | 31. | _ | -. |
| 45.Anna Frithioff | SWE | 32 | _ | -. | _ | -. |
| 46.Sumiko Yokoyama | JPN | 27 | 26 | 36. | _ | -. |
| 47.Hanne Lahtinen | FIN | 26 | 26 | 36. | _ | -. |
| 48.Andrea Huber | SUI | 25 | 11 | 49. | _ | -. |
| 48.Katrin Smigun | EST | 25 | 15 | 46. | 10 | 41. |
| 50.Anita Nyman Hakala | FIN | 24 | 24 | 38. | _ | -. |
| 50.Beckie Scott |  CAN | 24 | 9 | 50. | 2 | 51. |
| 52.Bernadeta Piotrowska Pocek |  POL | 21 | 21 | 40. | _ | -. |
| 53.Kati Wilhelm | GER | 19 | 9 | 50. | 3 | 49. |
| 54.Anna Slipenko | UKR | 18 | 1 | 62. | 15 | 39. |
| 54.Kerttu Tiikkainen | FIN | 18 | 9 | 50. | 9 | 42. |
| 54.Lilia Vasilieva | RUS | 18 | _ | -. | 18 | 32. |
| 57.Tomomi Otaka | JPN | 17 | 17 | 44. | _ | -. |
| 58.Iveta Fortova Zelingerova | CZE | 16 | _ | -. | _ | -. |
| 58.Natalia Novikova | RUS | 16 | _ | -. | 16 | 36. |
| 58.Cristina Paluselli | ITA | 16 | 16 | 45. | _ | -. |
| 61.Mareena Braennare | FIN | 13 | 13 | 48. | _ | -. |
| 61.Ramona Roth | GER | 13 | _ | -. | 5 | 45. |
| 63.Anita Olsen Katnosa | NOR | 12 | 7 | 54. | _ | -. |
| 64.Elin Ek | SWE | 11 | 5 | 59. | _ | -. |
| 64.Dorota Kwasna | POL | 11 | 7 | 54. | _ | -. |
| 66.Eva Kjerstadmo | NOR | 10 | 6 | 56. | 4 | 48. |
| 66.Oxana Yatskaya |  KAZ | 10 | _ | -. | _ | -. |
| 68.Zuzana Kocumova | CZE | 8 | _ | -. | _ | -. |
| 68.Kumiko Yokoyama | JPN | 8 | _ | -. | _ | -. |
| 70.Milla Saari | FIN | 6 | _ | -. | 6 | 44. |
| 70.Emiko Sato | JPN | 6 | 6 | 56. | _ | -. |
| 72.Nina Kemppel |  USA | 5 | _ | -. | 1 | 54. |
| 72.Olga Kosmatscheva | RUS | 5 | _ | -. | 5 | 45. |
| 74.Jana Saldova | CZE | 4 | _ | -. | _ | -. |
| 74.Karin Saterkvist | SWE | 4 | 4 | 60. | _ | -. |
| 76.Katerina Hanusova | CZE | 3 | _ | -. | 3 | 49. |
| 77.Sara Hugg | SWE | 2 | 1 | 62. | _ | -. |
| 77.Anu Kittila | FIN | 2 | _ | -. | 2 | 51. |
| 77.Kerrin Petty | USA | 2 | 2 | 61. | _ | -. |
| 77.Cristel Vahtra | EST | 2 | _ | -. | 2 | 51. |
| 81.Elena Gayasova | UKR | 1 | _ | -. | 1 | 54. |
